Browse of TCMCG002C08029 protein

CDS

Accession Number	TCMCG002C08029
gbkey	CDS
Protein Id	XP_020088373.1
Location	complement(join(155917..156000,156234..156312,156685..156804,157074..157174,157409..157534,158785..158880,158964..159086,159323..159466,160008..160145,160211..160381,161518..161682,162903..162980,163063..163192,163295..163485,163596..163668,163743..163798,163891..164049,164308..164421,164492..164584,165010..165207,165848..165925,166018..166104,166203..166284,166359..166471,166575..166725,166880..166998,167110..167307,168091..168208,168453..168572,168654..168784,169143..169283,169365..169466,170799..171005,171092..171208,172178..172333,172723..172812,173416..173643,173730..173852,173993..174075,174366..174525,174765..174875,175005..175109,175213..175287,176371..176466,176554..176694))
Gene	LOC109710274
GeneID	109710274
Organism	Ananas comosus

Protein

Length	1856aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020232784.1
Definition	nuclear pore complex protein NUP205 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGTCCCCGCGGGAGCTCCTCTCGACGATCGAGGACGCGCTCCTCGGGCCCGCTCCTCCCACCCCGACCCAGCGGATCGAGCTCATGCACGCCATCCGCAGTTCCCTCCCCGCTCTCCAATCCCTCCTTTCCTATCCGGGCCCCAAGGCATCTGATCGGGCTCAAGTGCAGTCCAAAGAGGTTCGGCTTCCCGATTCGCCACCAATCTCGCTCGACGACACGGATGTGAAGATTGCATTGAAACTGAGTGATGACCTCAATCTCAATGAAATTGAGTGTGTTCGTTTGCTCGTTGATGCTAATCGAGAGTGGATTCTGTATGGACGAGAGCCACTGGAGATATTTCGTCTTGCTGCGGGCCTTTGGTATATGGAGAGGAGAGATCTTATAACCTCTTTGTACATTCTTTTACGGTCTGTTGTACTTGATCAGGGGCTGGATGGTGGCCTTGTGGCTGATATTCAAAAACATATGGAGGATCTATTTAGCTCTGGTCTCAGGCAGCGGCTAATTATGCTTATAAAAGAACTAAATCGTGAAGAACCTGCTGGTGTCGGCCATCAGAATGCTGAACGGTATGTCCTGGACTTCAGAGGTGCTCTTGTGGAGCGACGTGCTGTAGTGCTGCGGGAGAGACTGAGTTTGAGTCACTGCCTTGCATTATCAGTCCTTATTATAAGGATGAGTCCTAAAGATTTAAAAGATGTGCTATCAACTTTGAAGGATTGTGCAGCTGATGTTGATGAAAATACTACAGTACAATTGCAGATCACATTCGGTGTTCTCTTTTCCCTTGTAATAGCTTTCATCTCTGATGCTCTAAGAACATCCCCTGATACGGCATCCACGTTGTCATCTGATGCCTCCTTCAGACATGAATTTCATGGATTAGTGATGAGTGCTGGTAACAATACAAATATTGAGGGGTTTGTTCATGTAGTGCGACTTGCATGGGCTGTACATTTGATGTTAACTCAAGATCAAAGTACTATGACAGATGCTCCATCGAGTGCTTCTTCCAGGGACTTGGCAAATATTTGCTCATGTCTCGAAGTTATTTGCTCAAACAATGTCTTTCAGTTTTTACTGGGAAATGTTATCAAAACTGCTGCTTATCAGAATGATGATGAGGACATGGTTTATATGTATAATGGGTACTTACACAAGCTCATGATGTGCTTTGTTTCACACCCACTTACTAGGGAGAAGGTGAAGGAAATGAAGGAGAAAGCCATGAGTGCCCTTAGTCCTTACATCTCTCCAAGGTTGGATGATTTTAGAGATATTAATAATCTAAAAGAAGGTTCTCCTGGAAGTACTCAGCCTTTTGTATCTTTATTGGAATTGGTTAGAGAAATCTATCAGAAGGAGCCTGAGTTGCTGCATGGCAATGAAGAGTTATGGACATTTGTCACCACTGCTGGGGAAGATCATACTAATATTGAAACTCTTGTAGCTTTCTTGAGACTTCTTAGCACTCTGGCTTCTAATGAAGAAGGTGCTTCAAGAGTTTATGAGTTGCTCAATGGTAAAGTGTTTCGGTCAGTTGGGTGGAGCACCTTGTTTGACTGCTTATCTATTTACGAGGAGAAGTTTAAACAGGCTCTCCAATCTTCTGGGACCATGTTGCCTGATTTTCAGGAGGGTGATGCAAAAGCACTTGTTGCTTATTTGGATGTTCTTAAGAAGGTAGTTGAAAATGGAAATCCTACTGAAAGAAAAAAATGGTTCTCAGATATTGAACCATTATTTAAGCTTCTTGGTTATGAGAGTGTGCCCCCATATCTAAAGGGAGCTTTGCGAAATGCTATTACAGCATTTGTCAAAGTTTCACCTGTCCAGAGAGATACTATCTGGAGTTTCCTTGAGCAATATGATCTTCCCGTAGTAGTTGCTCCTTCAGTTAGCAGTGGACAACATATAACCACACAGATTTATGACATGCGATATGAGCTGAATGAATTTGAAGCCAGGAGGGAAAGGTATCCGTCTACAATATCCTTTCTTAACTTGATAAATGCTCTTATTGCGGAGGAGCGAGATGTAAGTGATAGAGGAAGAAGATTTGTAGGCATCTTTAGGTTTGTTTATGATTATGTCTTTGGGCCCTTTCCTCAAAGGGCGTATGCTGATCCTTGTGAAAAATGGCAGCTGGTTCTTGCTTGCCTCGAGCACTTTCGGTTGGTTTTGAGCATGTACGACATCAAAGATGAGGATATTGCAAGTGCTATTGACATGAAGCCGTCAATGCCTCATGCTTCCTCTGTTGAGACACAGATCCCTGTGCTAGAGCTGTTAAAAGATTTCATGAGCGGTAAAATCGTCTTTCGCAATATCATGAGTATCATTTTGTTGGGTGTGAATACCATTATCAATGAGCGGACAACTCAAATATATGGCATATTATTAGAGAGAGCTGTACATCTTTCACTGGAAATAATTGTTCTTGTTATGGAGAGGGATTTGGTTCTCTCTGACTTCTGGCGTCCATTATACCAGCCCTTGGATGCCATATTATCTCAAGATCATAGACACATAGTTGCGTTGCTGGAGTATGTACGATACGATTTTCTACCTCAGATTCAACAGTGCTCGATAAAGATCATGAGCGTCTTAAGTTCGAGAATAGTTGGCCTTGTACAGTTATTGTTGAAAGCAGATGCTGCAAAATCTCTTGTTGAGGATTATGCAACTTGTTTGGAGTTACGTTTTGATGAGTGTCAGATCATAGAGAACACAAAAGATGATGTCGGTGTTCTTATTTTGCAGCTTCTTATTGATAATATCAGCCGTCCTGCACCAAACATCACTCATCTGCTTCTGAGATTTGATGTTGATAGTTCTGTGGATCGGACAACATTACAGCCAAAGTTCCATTACAGTTGTTTGAAGGTTATACTTGATAATCTCGAGAAATTATCCAAACCAAATATTAATGCTTTACTGCATGAGTTTGGTTTCCAGCTTCTCTATGAAATATGTGTAGATCCATTAACTTCTGGCCCTATAATGGATCTTTTGAGTACAAAAAAGTACCAGTGCTTTTCAAAGCACATTGAAACTTTTGCTGTTGCTCCACTCCCCAAAAGAAACAACAATCAGGCTCTTCGCATCAGTACACTCCATCAGAGGGCATGGCTGTTAAAGCTATTAGCATTGGAGCTACATCTTGCTGATATGGCTTCATCTACACATTGGGAAACATGCCTAGCTATTCTTTCTCATACTTTTCTTCAATGCGCTGCTGAGAGATGGAGTCCAAACAATTTGCAAACTTTTGAGGCAGATCCTAACCTTGTTCGAAATAGGCCAATCAATAGAAAAAAGGTGTTGGAATTGCTTGAAGTTATCCAGTTTAGGTCTCCTGACACTTCTATGAAATATCCACAGCTTCTTTCTAATTTAAAATATGATGCGAAGGTTGAAGATATACTGAGAAATCCTGCAACATCGGAATCCGGTGGCATATATTATTATTCAGAGCGGGGTGATCGACTGATTGACCTTGATGCACTTCATGAAAAACTTCTGCAGATGTCTCGAGAATTGAGCTCTCGTCTGAATGAGGTCGAGAAGGCTGAGCTAAGAGAGTCATTCCATCATATGTTGAAATGGTGTTGGAGATACAACAAAAATCTTGAAGAACAGGCAGCACAGCTGCACATGTTAACTGGATGGTCTCAGATTGTTGAGGTTGCTGTATCTAGAAGAATGTCTCTCCTTGAAGATCGTTCTCAATTATTGTTTGAGTTGCTTGATGCTTCGTTGAGTGCAACAGTATCTCCAGATTGCTCGGTAAAAATGGCAGTAATCTTAACCAATGTAGCACTCACTTGTATGGCTAAACTTCGGGATGAAAGATTCTTATGTCCTGCTGGCTTTGATTCTGATAGTGTAACATGTCTTGACATTATCTCGGTTAAGCAGTTGTCTAATGGTGCTTGTCAATCTATATTGTTTAAGCTTATGATGTCTATTCTTAGAAGTGAATCATCAGAATCTTTGAGAAGACGACAATATGCTTTACTTCTGAGTTACTTTCAATACTGTCGGAGTTTTCTTGACCCAGATGTACCACCGTCAGTTTTGCGCTTCTTGCTTTCTGAAGAAGAAGATGGAGAAGATGAGCTGAATCTTCAAAAGATTGACAAGGAGCAAGACGAGCTAGCCCGAGCCAATTTCACCATAATAAGAAAAGAGGCTCAAGCTATCATTGATCTGATAACGAAGGATGCCGTTCAAGGCAGCGAAGCTGGGAAGGCTATTTCATTTTATGTTCTTGATGCATTCATTAGTATTGACCATGAAAAGTTTTTCTTAAGCCAGCTGCAAAGTAGAGAAATTCTCAAATCATGCATGAGAGAAATCAGTAATTTATCTCTGAAGGATGCTTCAGGCTCTTTGGATTCTCTTCAGCGCTTTTGCACTATTGAGGCTCAATTGTCTTTGCTCCTGAGAATTGGCCACAACTATGGCAAGCATGGCTCTCAGATTCTATTGTCCATGGGTGCTTTGGAACATCTAGCATCATGCAAGGTTTTGGCTTTGCAGAGCAAGGGAAGTTCAAGGTTGGTTAGTCATAACAAAAGCAAAGATAGAGCTGGGGAGACTGACAAGGAGAAGTTGCTTGTATCTCCAATTCTGAGATTGGTCTCATGCCTGGCATCATTAGTTGACTCATCAGATTTTCTGGAGGTGAACAATAAAATTGTTCGTGAGGTTTTGGAATTTGTAAAGGAAAATCAGGCAATTTTTCATCATAATTTAAAGGGAGATATCTCTGGAGCTGATGAGTTCACATTGGAGCGTGTTAATCTTGTTGTCTCTATACTCAGCAAGGTTTGGCCATATGAAGAAGATGATCATTATGGATTTGTTCATAAACTTTTTACCATGATGCACTCTCTTTTTAATATGGATGCTCAACCTTCCAATTTTATGCAATCGTCGGATTTTCTTGAGAACCAGAAGAGGACTGAGCTAATAATGTTCCGTATATGCTTTGGCCTGAGCTCTTACCTTTATTTTCTCATCAGGAAGAAGCTTGTGACATTGCAAGTTTTAAATTCTGATGGTGATCTGAATAGGCAGCCACCTACCTTAGAATCGCTCTTGGCTCTTCTTAACTCAATAGCAATTACTCTTGAAAGTGCAGGGGAAGAAAAAATTTTGTTGCTCAACAAGATTCGAGACATTAACGAACTTCCAAGACAGGATGTAGATGAAATAATCAAAGTATGCATGAGGCAAGATTGCATCTCTTCTTCTGATGATATTCGTAAGAGGAGATACATTGCGATGATAGAGATGTGCCACATGGTTGGGAATAGGGATCGCCTCATTACTCTCCTGCTCCAGCTTGCTGAGTGTGCTATCAACATCATTCTTATTCATTTTCAGGATGACAATACTGATCCACAAGATCTTTCTTTGTTTTGTGGGAAATTGCATCCTATTCTGGAAAGACTAGAGCAGTTCAAAGAGGATAAGATTGGGCAGAATCTCAAGTTATTCCATAGATCTTTAAGTACCCTCAAAGAGATGTCTATCAGAAAAATGGCTTTGTAA

Protein:   MVSPRELLSTIEDALLGPAPPTPTQRIELMHAIRSSLPALQSLLSYPGPKASDRAQVQSKEVRLPDSPPISLDDTDVKIALKLSDDLNLNEIECVRLLVDANREWILYGREPLEIFRLAAGLWYMERRDLITSLYILLRSVVLDQGLDGGLVADIQKHMEDLFSSGLRQRLIMLIKELNREEPAGVGHQNAERYVLDFRGALVERRAVVLRERLSLSHCLALSVLIIRMSPKDLKDVLSTLKDCAADVDENTTVQLQITFGVLFSLVIAFISDALRTSPDTASTLSSDASFRHEFHGLVMSAGNNTNIEGFVHVVRLAWAVHLMLTQDQSTMTDAPSSASSRDLANICSCLEVICSNNVFQFLLGNVIKTAAYQNDDEDMVYMYNGYLHKLMMCFVSHPLTREKVKEMKEKAMSALSPYISPRLDDFRDINNLKEGSPGSTQPFVSLLELVREIYQKEPELLHGNEELWTFVTTAGEDHTNIETLVAFLRLLSTLASNEEGASRVYELLNGKVFRSVGWSTLFDCLSIYEEKFKQALQSSGTMLPDFQEGDAKALVAYLDVLKKVVENGNPTERKKWFSDIEPLFKLLGYESVPPYLKGALRNAITAFVKVSPVQRDTIWSFLEQYDLPVVVAPSVSSGQHITTQIYDMRYELNEFEARRERYPSTISFLNLINALIAEERDVSDRGRRFVGIFRFVYDYVFGPFPQRAYADPCEKWQLVLACLEHFRLVLSMYDIKDEDIASAIDMKPSMPHASSVETQIPVLELLKDFMSGKIVFRNIMSIILLGVNTIINERTTQIYGILLERAVHLSLEIIVLVMERDLVLSDFWRPLYQPLDAILSQDHRHIVALLEYVRYDFLPQIQQCSIKIMSVLSSRIVGLVQLLLKADAAKSLVEDYATCLELRFDECQIIENTKDDVGVLILQLLIDNISRPAPNITHLLLRFDVDSSVDRTTLQPKFHYSCLKVILDNLEKLSKPNINALLHEFGFQLLYEICVDPLTSGPIMDLLSTKKYQCFSKHIETFAVAPLPKRNNNQALRISTLHQRAWLLKLLALELHLADMASSTHWETCLAILSHTFLQCAAERWSPNNLQTFEADPNLVRNRPINRKKVLELLEVIQFRSPDTSMKYPQLLSNLKYDAKVEDILRNPATSESGGIYYYSERGDRLIDLDALHEKLLQMSRELSSRLNEVEKAELRESFHHMLKWCWRYNKNLEEQAAQLHMLTGWSQIVEVAVSRRMSLLEDRSQLLFELLDASLSATVSPDCSVKMAVILTNVALTCMAKLRDERFLCPAGFDSDSVTCLDIISVKQLSNGACQSILFKLMMSILRSESSESLRRRQYALLLSYFQYCRSFLDPDVPPSVLRFLLSEEEDGEDELNLQKIDKEQDELARANFTIIRKEAQAIIDLITKDAVQGSEAGKAISFYVLDAFISIDHEKFFLSQLQSREILKSCMREISNLSLKDASGSLDSLQRFCTIEAQLSLLLRIGHNYGKHGSQILLSMGALEHLASCKVLALQSKGSSRLVSHNKSKDRAGETDKEKLLVSPILRLVSCLASLVDSSDFLEVNNKIVREVLEFVKENQAIFHHNLKGDISGADEFTLERVNLVVSILSKVWPYEEDDHYGFVHKLFTMMHSLFNMDAQPSNFMQSSDFLENQKRTELIMFRICFGLSSYLYFLIRKKLVTLQVLNSDGDLNRQPPTLESLLALLNSIAITLESAGEEKILLLNKIRDINELPRQDVDEIIKVCMRQDCISSSDDIRKRRYIAMIEMCHMVGNRDRLITLLLQLAECAINIILIHFQDDNTDPQDLSLFCGKLHPILERLEQFKEDKIGQNLKLFHRSLSTLKEMSIRKMAL